/*
#Copyright (c) 2013, Philippe Bordron <philippe.bordron@gmail.com>
#
# This file is part of SIPPER.
#
# DCC is free software: you can redistribute it and/or modify
# it under the terms of the GNU LESSER GENERAL PUBLIC LICENSE as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) any later version.
#
# DCC is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
# GNU LESSER GENERAL PUBLIC LICENSE for more details.
#
# You should have received a copy of the GNU LESSER GENERAL PUBLIC LICENSE
# along with SIPPER.  If not, see <http://www.gnu.org/licenses/>
*/
package combi.wip.sipper.modeling.metabolicNetworks;

import java.util.Collection;

import combi.wip.sipper.modeling.Protein;
import combi.wip.sipper.modeling.reactions.Reaction;

public class FilteredPathway<C, R extends Reaction<C>, E extends Protein> extends ImplOfFilteredMetabolicNetworkWithEnzymes<C,R, E>{

	public FilteredPathway(MetabolicNetworkWithEnzymes<C,R,E> meta, Collection<C> filteredCompounds, Collection<Reaction<C>> selectedReactions)
	{
		super(filteredCompounds);
		for (Reaction<C> r : selectedReactions)
		{
			this.addReaction(r);
			for (Protein enz : meta.getEnzymes(r))
			{
				this.addCatalyze(enz, r);
			}
		}
	}
}
